rpmA protein (Bradyrhizobium sp.) - STRING interaction network

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second shell of interactors

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Predicted Interactions

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Score

rpmA

LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family. (89 aa)

Predicted Functional Partners:

rplM

0.991

rplQ

0.989

rplU

0.988

rplS

0.987

rplP

0.986

rpsI

0.985

rpsB

0.985

rplL

0.984

rplC

0.983

rpsQ

0.982

Your Current Organism:

Bradyrhizobium sp.

NCBI taxonomy Id: 376
Other names: B. sp.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplC	rplL	BF49_6230	BF49_6217	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.980
rplC	rplM	BF49_6230	BF49_6600	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L13p L13Ae; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.996
rplC	rplP	BF49_6230	BF49_6237	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L16p L10e; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.998
rplC	rplQ	BF49_6230	BF49_6256	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L17p.	0.988
rplC	rplS	BF49_6230	BF49_0371	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.971
rplC	rplU	BF49_6230	BF49_0439	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.962
rplC	rpmA	BF49_6230	BF49_0438	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.	0.983
rplC	rpsB	BF49_6230	BF49_6701	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S2p SAe; Belongs to the universal ribosomal protein uS2 family.	0.984
rplC	rpsI	BF49_6230	BF49_6601	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S9p S16e; Belongs to the universal ribosomal protein uS9 family.	0.984
rplC	rpsQ	BF49_6230	BF49_6239	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S17p S11e; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.989
rplL	rplC	BF49_6217	BF49_6230	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L3p L3e; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.980
rplL	rplM	BF49_6217	BF49_6600	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L13p L13Ae; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.982
rplL	rplP	BF49_6217	BF49_6237	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L16p L10e; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.987
rplL	rplQ	BF49_6217	BF49_6256	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L17p.	0.976
rplL	rplS	BF49_6217	BF49_0371	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.981
rplL	rplU	BF49_6217	BF49_0439	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.970
rplL	rpmA	BF49_6217	BF49_0438	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.	0.984
rplL	rpsB	BF49_6217	BF49_6701	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S2p SAe; Belongs to the universal ribosomal protein uS2 family.	0.989
rplL	rpsI	BF49_6217	BF49_6601	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S9p S16e; Belongs to the universal ribosomal protein uS9 family.	0.976
rplL	rpsQ	BF49_6217	BF49_6239	LSU ribosomal protein L7L12 P1P2; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S17p S11e; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.978