Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0448FIG00442104 hypothetical protein. (387 aa)    
Predicted Functional Partners:
BF49_5782
Flagellar hookassociated protein FlgL.
  
     0.755
BF49_5969
Bll5679 protein.
  
     0.751
BF49_5748
FIG00440209 hypothetical protein.
  
     0.749
BF49_0857
Hypothetical protein.
  
     0.746
BF49_5139
FIG00886901 hypothetical protein.
  
     0.745
BF49_6069
FIG00441943 hypothetical protein.
  
     0.743
BF49_3479
FIG00440260 hypothetical protein.
  
     0.739
BF49_6270
Hypothetical protein.
  
     0.736
BF49_4392
Hypothetical protein.
  
     0.733
BF49_5720
FIG00442610 hypothetical protein.
  
     0.733
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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