Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BF49_0449 | BF49_0489 | Transcriptional regulatory protein. | Adenylate cyclase EC 4611. | 0.577 |
BF49_0449 | BF49_0769 | Transcriptional regulatory protein. | Twocomponent hybrid sensor and regulator. | 0.608 |
BF49_0449 | BF49_1446 | Transcriptional regulatory protein. | Sensory box histidine kinaseresponse regulator. | 0.803 |
BF49_0449 | BF49_2038 | Transcriptional regulatory protein. | Phytochrome twocomponent sensor histidine kinase EC 273. | 0.764 |
BF49_0449 | BF49_2142 | Transcriptional regulatory protein. | Twocomponent hybrid sensor and regulator. | 0.833 |
BF49_0449 | BF49_3244 | Transcriptional regulatory protein. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.617 |
BF49_0449 | BF49_4016 | Transcriptional regulatory protein. | Twocomponent sensor histidine kinase. | 0.576 |
BF49_0449 | BF49_4032 | Transcriptional regulatory protein. | Naproline symporter Sensor histidine kinase PrlS. | 0.590 |
BF49_0449 | BF49_5406 | Transcriptional regulatory protein. | Twocomponent sensor histidine kinase. | 0.674 |
BF49_0449 | BF49_6352 | Transcriptional regulatory protein. | Twocomponent sensor histidine kinase. | 0.715 |
BF49_0489 | BF49_0449 | Adenylate cyclase EC 4611. | Transcriptional regulatory protein. | 0.577 |
BF49_0489 | BF49_0769 | Adenylate cyclase EC 4611. | Twocomponent hybrid sensor and regulator. | 0.688 |
BF49_0489 | BF49_1446 | Adenylate cyclase EC 4611. | Sensory box histidine kinaseresponse regulator. | 0.664 |
BF49_0489 | BF49_2038 | Adenylate cyclase EC 4611. | Phytochrome twocomponent sensor histidine kinase EC 273. | 0.418 |
BF49_0489 | BF49_2142 | Adenylate cyclase EC 4611. | Twocomponent hybrid sensor and regulator. | 0.844 |
BF49_0489 | BF49_3244 | Adenylate cyclase EC 4611. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.714 |
BF49_0489 | BF49_4032 | Adenylate cyclase EC 4611. | Naproline symporter Sensor histidine kinase PrlS. | 0.529 |
BF49_0769 | BF49_0449 | Twocomponent hybrid sensor and regulator. | Transcriptional regulatory protein. | 0.608 |
BF49_0769 | BF49_0489 | Twocomponent hybrid sensor and regulator. | Adenylate cyclase EC 4611. | 0.688 |
BF49_0769 | BF49_1446 | Twocomponent hybrid sensor and regulator. | Sensory box histidine kinaseresponse regulator. | 0.954 |
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