Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BF49_0453 | BF49_0461 | Twocomponent response regulator. | Twocomponent response regulator. | 0.651 |
BF49_0453 | BF49_2179 | Twocomponent response regulator. | Osmosensitive K channel histidine kinase KdpD EC 273. | 0.781 |
BF49_0453 | BF49_2205 | Twocomponent response regulator. | Twocomponent sensor histidine kinase. | 0.776 |
BF49_0453 | BF49_2418 | Twocomponent response regulator. | Twocomponent response regulator. | 0.777 |
BF49_0453 | BF49_3244 | Twocomponent response regulator. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.949 |
BF49_0453 | BF49_3270 | Twocomponent response regulator. | Twocomponent response regulator. | 0.766 |
BF49_0453 | BF49_3370 | Twocomponent response regulator. | Twocomponent sensor histidine kinase. | 0.735 |
BF49_0453 | BF49_3575 | Twocomponent response regulator. | Twocomponent sensor histidine kinase. | 0.768 |
BF49_0453 | BF49_4311 | Twocomponent response regulator. | Twocomponent hybrid sensor and regulator. | 0.781 |
BF49_0461 | BF49_0453 | Twocomponent response regulator. | Twocomponent response regulator. | 0.651 |
BF49_0461 | BF49_0768 | Twocomponent response regulator. | Twocomponent response regulator. | 0.639 |
BF49_0461 | BF49_2179 | Twocomponent response regulator. | Osmosensitive K channel histidine kinase KdpD EC 273. | 0.778 |
BF49_0461 | BF49_2205 | Twocomponent response regulator. | Twocomponent sensor histidine kinase. | 0.769 |
BF49_0461 | BF49_2418 | Twocomponent response regulator. | Twocomponent response regulator. | 0.687 |
BF49_0461 | BF49_3244 | Twocomponent response regulator. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.684 |
BF49_0461 | BF49_3270 | Twocomponent response regulator. | Twocomponent response regulator. | 0.647 |
BF49_0461 | BF49_3370 | Twocomponent response regulator. | Twocomponent sensor histidine kinase. | 0.752 |
BF49_0461 | BF49_3575 | Twocomponent response regulator. | Twocomponent sensor histidine kinase. | 0.730 |
BF49_0461 | BF49_4311 | Twocomponent response regulator. | Twocomponent hybrid sensor and regulator. | 0.762 |
BF49_0768 | BF49_0461 | Twocomponent response regulator. | Twocomponent response regulator. | 0.639 |
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