Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0466Taurine transport ATPbinding protein TauB. (253 aa)    
Predicted Functional Partners:
BF49_0467
Taurine transport system permease protein TauC.
 
 0.995
BF49_0465
Taurine transporter substratebinding protein.
 
 0.994
BF49_7267
Alkanesulfonates transport system permease protein.
 
 0.979
BF49_1494
Alkanesulfonates transport system permease protein.
 
 0.976
BF49_5184
Hydroxymethylpyrimidine ABC transporter transmembrane component.
 
 0.964
BF49_7268
ABCtype nitratesulfonatebicarbonate transport systems periplasmic components.
 
 0.946
BF49_5186
Hydroxymethylpyrimidine ABC transporter substratebinding component.
 
 0.929
BF49_2689
Alkanesulfonate monooxygenase EC 114145.
  
 
 0.918
BF49_1493
Organosulfonate ABC transporter substratebinding protein.
  
 0.913
BF49_5025
Taurine transport system permease protein TauC.
 
 0.895
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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