Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0467Taurine transport system permease protein TauC. (285 aa)    
Predicted Functional Partners:
BF49_0465
Taurine transporter substratebinding protein.
 
 0.995
BF49_0466
Taurine transport ATPbinding protein TauB.
 
 0.995
BF49_1495
ABCtype probable sulfate transporter ATPase component.
 
 0.973
BF49_5183
ABCtype nitratesulfonatebicarbonate transport system ATPase component.
 
 0.970
BF49_7266
Alkanesulfonates ABC transporter ATPbinding protein Sulfonate ABC transporter ATPbinding subunit SsuB.
 
 0.968
BF49_7268
ABCtype nitratesulfonatebicarbonate transport systems periplasmic components.
 
 0.967
BF49_5186
Hydroxymethylpyrimidine ABC transporter substratebinding component.
 
 0.939
BF49_5026
Taurinebinding periplasmic protein TauA.
 
 
 0.925
BF49_1493
Organosulfonate ABC transporter substratebinding protein.
 
 0.922
BF49_2689
Alkanesulfonate monooxygenase EC 114145.
  
 
 0.919
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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