Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_0469Demethylmenaquinone methyltransferase. (239 aa)    
Predicted Functional Partners:
BF49_3413
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
    
 0.889
BF49_0468
Dihydroxyacid dehydratase EC 4219; Belongs to the IlvD/Edd family.
 
     0.741
BF49_1200
4oxalmesaconate hydratase EC 42183.
 
  
 0.739
BF49_1726
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
    
 0.698
BF49_0917
NADdependent malic enzyme EC 11138.
    
 0.563
BF49_1197
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
 
     0.550
BF49_0467
Taurine transport system permease protein TauC.
       0.546
BF49_1227
Catechol 23dioxygenase EC 113112.
 
   
 0.514
BF49_0464
Predicted biotin regulatory protein BioR GntR family.
 
     0.507
BF49_0465
Taurine transporter substratebinding protein.
       0.503
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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