STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0469Demethylmenaquinone methyltransferase. (239 aa)    
Predicted Functional Partners:
BF49_3413
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
    
 0.890
BF49_1200
4oxalmesaconate hydratase EC 42183.
 
  
 0.750
BF49_0468
Dihydroxyacid dehydratase EC 4219; Belongs to the IlvD/Edd family.
 
     0.742
BF49_1726
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
    
 0.699
BF49_1197
3hydroxyisobutyrate dehydrogenase and related betahydroxyacid dehydrogenases.
 
     0.550
BF49_0467
Taurine transport system permease protein TauC.
       0.542
BF49_4436
FIG00794837 hypothetical protein.
 
   
 0.520
BF49_1227
Catechol 23dioxygenase EC 113112.
 
   
 0.514
BF49_0917
NADdependent malic enzyme EC 11138.
    
 0.511
BF49_0464
Predicted biotin regulatory protein BioR GntR family.
 
     0.508
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.