STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0477FIG00442145 hypothetical protein. (295 aa)    
Predicted Functional Partners:
BF49_0493
RND multidrug efflux transporter Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.866
BF49_6323
Macrolide export ATPbindingpermease protein MacB EC 363.
 
 0.730
BF49_1658
Type I secretion outer membrane protein TolC precursor.
  
 0.691
BF49_7038
Type I secretion outer membrane protein TolC precursor.
  
 0.691
BF49_0494
Secretion protein HlyD.
 
  
 
0.657
BF49_0532
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.636
BF49_0534
Probable CoZnCd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.628
BF49_2379
COGs COG0845; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.617
BF49_1835
Probable CoZnCd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.615
BF49_4578
Heavy metal RND efflux outer membrane protein CzcC family.
 
 0.614
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.