STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0494Secretion protein HlyD. (309 aa)    
Predicted Functional Partners:
BF49_0493
RND multidrug efflux transporter Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.965
BF49_6323
Macrolide export ATPbindingpermease protein MacB EC 363.
  
 0.673
BF49_4578
Heavy metal RND efflux outer membrane protein CzcC family.
 
 0.631
BF49_6626
Heavy metal RND efflux outer membrane protein CzcC family.
 
 0.613
BF49_6624
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.593
BF49_4580
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.592
BF49_0948
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.589
BF49_6409
FIG00443059 hypothetical protein.
 
     0.587
BF49_3228
Transcriptional regulator TetR family.
 
     0.583
BF49_4590
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.575
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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