STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0501Metallobetalactamase family protein. (318 aa)    
Predicted Functional Partners:
BF49_0499
Salicylate hydroxylase EC 114131.
 
    0.937
BF49_0500
Bsl0345 protein.
 
     0.928
hmgA
Homogentisate 12dioxygenase EC 113115; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
   
 0.916
BF49_0498
Transcriptional regulator MarR family.
 
     0.699
BF49_0503
Fumarylacetoacetase EC 3712.
 
    0.661
BF49_0507
4hydroxyphenylpyruvate dioxygenase EC 1131127.
 
  
 0.574
BF49_3519
Maleylacetoacetate isomerase EC 5212 Glutathione Stransferase zeta EC 25118.
 
 
   0.560
BF49_1797
PhenylacetateCoA oxygenasereductase PaaK subunit.
  
     0.442
BF49_4342
Opine oxidase subunit A.
   
 0.435
BF49_6971
Hypothetical protein.
   
 0.428
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.