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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metASHomoserine Osuccinyltransferase EC 23146; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family. (333 aa)    
Predicted Functional Partners:
BF49_0538
Oacetylhomoserine sulfhydrylase EC 25149.
 
 
 0.996
BF49_3417
Oacetylhomoserine sulfhydrylase EC 25149.
 
 
 0.987
BF49_6596
Oacetylhomoserine sulfhydrylase EC 25149.
 
 
 0.986
BF49_0689
Homoserine dehydrogenase EC 1113.
  
 
 0.977
BF49_4190
5methyltetrahydrofolatehomocysteine methyltransferase EC 21113; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.883
BF49_4191
510methylenetetrahydrofolate reductase EC 15120; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.872
BF49_5736
Cystathionine gammasynthase EC 25148.
 
 
 0.871
BF49_7070
Cystathionine betalyase EC 4418.
 
 
 0.860
BF49_5168
Phosphoserine phosphatase EC 3133.
     
 0.830
trpB
Tryptophan synthase beta chain EC 42120; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
  0.821
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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