STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0540Polysaccharide deacetylase. (247 aa)    
Predicted Functional Partners:
BF49_2679
Polysaccharide biosynthesis protein.
 
   
 0.726
BF49_0115
Exopolysaccharide production protein ExoQ.
 
   
 0.703
BF49_3357
FIG00440904 hypothetical protein.
  
     0.604
BF49_3950
FIG00440537 hypothetical protein.
 
 
 0.583
BF49_4492
Glucans biosynthesis protein C EC 21.
 
   
 0.583
BF49_5467
2oxo4hydroxy4carboxy5ureidoimidazoline OHCU decarboxylase 5Hydroxyisourate Hydrolase HIUase EC 35217.
  
 
  0.580
BF49_0114
FIG01006394 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.564
BF49_3105
Putative Omethyl transferase.
 
   
 0.546
metAS
Homoserine Osuccinyltransferase EC 23146; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
       0.527
BF49_2785
4amino4deoxyLarabinose transferase and related glycosyltransferases of PMT family.
 
 
 0.521
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.