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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0540Polysaccharide deacetylase. (247 aa)    
Predicted Functional Partners:
BF49_0115
Exopolysaccharide production protein ExoQ.
 
   
 0.699
BF49_2679
Polysaccharide biosynthesis protein.
 
   
 0.694
BF49_3357
FIG00440904 hypothetical protein.
  
     0.604
BF49_4492
Glucans biosynthesis protein C EC 21.
 
   
 0.586
BF49_3950
FIG00440537 hypothetical protein.
 
 
 0.583
BF49_5467
2oxo4hydroxy4carboxy5ureidoimidazoline OHCU decarboxylase 5Hydroxyisourate Hydrolase HIUase EC 35217.
  
 
  0.582
BF49_6886
Beta13glucosyl transferase.
  
  
 0.574
BF49_2479
Dolicholphosphate mannosyltransferase EC 24183 in lipidlinked oligosaccharide synthesis cluster.
  
  
 0.562
BF49_2591
Bacteriophage N4 adsorption protein B.
  
  
 0.562
BF49_5239
Putative bifunctional transferasedeacetylase.
  
  
 0.562
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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