Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0545FIG00442992 hypothetical protein. (186 aa)    
Predicted Functional Partners:
BF49_1975
Carboxymuconolactone decarboxylase.
  
     0.757
BF49_1126
Hypothetical protein.
  
     0.658
cysC
Sulfate adenylyltransferase subunit 1 EC 2774 Adenylylsulfate kinase EC 27125; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
   
    0.574
BF49_0544
Cysteine synthase EC 25147.
  
    0.565
BF49_2671
Hypothetical protein.
  
     0.548
BF49_4102
HMPPP hydrolase pyridoxal phosphatase Cof detected in genetic screen for thiamin metabolic genes PMID15292217.
  
 
  0.529
BF49_6940
ABC transporter substratebinding protein.
  
     0.505
BF49_3217
FIG00441126 hypothetical protein.
  
     0.497
BF49_1198
45dihydroxyphthalate decarboxylase EC 41155.
 
    0.495
BF49_3257
FIG00440381 hypothetical protein.
  
 
  0.458
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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