STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0568FIG004851 hypothetical protein. (161 aa)    
Predicted Functional Partners:
BF49_0569
FIG147869 Carbonnitrogen hydrolase Aliphatic amidase AmiE EC 3514.
       0.853
BF49_0570
Glutaredoxin 3 Grx2; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
       0.853
BF49_0571
Competence protein F homolog phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy.
       0.795
BF49_4297
Thiaminphosphate pyrophosphorylase EC 2513.
  
    0.668
BF49_0572
SAMdependent methyltransferase BioClike.
       0.578
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
  
     0.510
BF49_0606
Aerobic cobaltochelatase CobT subunit EC 6612.
  
     0.494
BF49_4990
Aerobic cobaltochelatase CobT subunit EC 6612.
  
     0.420
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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