STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0585Urea ABC transporter ATPase protein UrtD. (244 aa)    
Predicted Functional Partners:
BF49_0582
Urea ABC transporter permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
BF49_0584
Urea ABC transporter permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
BF49_0583
Urea ABC transporter substrate binding protein UrtA.
 
 
  0.949
BF49_0586
Urea ABC transporter ATPase protein UrtE.
 
 
0.905
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.897
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.888
BF49_0580
Putative nitrile hydratase regulator clustered with urea transport.
 
 
  0.817
BF49_7221
Urea ABC transporter permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.812
BF49_2027
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.810
BF49_6016
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.784
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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