STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0601FIG139438 lipoprotein B. (219 aa)    
Predicted Functional Partners:
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
    
 0.596
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
    
 0.568
BF49_5049
UDPNacetylmuramoylalanylDglutamyl26 diaminopimelateDalanylDalanine ligase EC 63210.
 
  
  0.554
BF49_6648
NADHubiquinone oxidoreductase chain J EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
  
  0.541
BF49_6323
Macrolide export ATPbindingpermease protein MacB EC 363.
  
  
 0.511
BF49_0600
Hypothetical protein.
       0.496
BF49_0602
Hypothetical protein.
       0.489
BF49_2365
Aerobic glycerol3phosphate dehydrogenase EC 1153; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
  0.486
mntH
Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
   
 0.479
BF49_4424
Glycerol3phosphate dehydrogenase EC 1153.
 
  
  0.477
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.