STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0607ABCtype cobalaminFe3siderophores transport systems ATPase components. (353 aa)    
Predicted Functional Partners:
BF49_0606
Aerobic cobaltochelatase CobT subunit EC 6612.
       0.798
BF49_0604
Acetyltransferase EC 231.
       0.718
BF49_0605
Hypothetical protein.
       0.718
BF49_0603
Aerobic cobaltochelatase CobS subunit EC 6612.
       0.700
BF49_1620
FIG00440661 hypothetical protein.
  
     0.673
BF49_3990
Putative transmembrane protein.
  
     0.670
BF49_0025
Universal stress protein UspA and related nucleotidebinding proteins.
  
     0.657
BF49_7350
Universal stress protein UspA and related nucleotidebinding proteins.
  
     0.657
BF49_4267
InterPro IPR002797 COGs COG2244.
  
     0.644
BF49_6497
Bsl5083 protein.
  
     0.605
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.