STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_06214Fe4S ferredoxin ironsulfur binding; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (112 aa)    
Predicted Functional Partners:
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 
 0.928
mdh
Malate dehydrogenase EC 11137; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.840
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
  
 0.798
cysC
Sulfate adenylyltransferase subunit 1 EC 2774 Adenylylsulfate kinase EC 27125; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
    
 0.760
BF49_1964
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 
 0.690
BF49_3115
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 
 0.690
BF49_6292
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 
 0.690
BF49_6293
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits.
  
 
 0.690
BF49_3172
Glutamate synthase NADPH small chain EC 14113.
  
 0.687
BF49_4848
Sulfopyruvate decarboxylase beta subunit EC 41179.
  
 
 0.658
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.