STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0625Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion. (291 aa)    
Predicted Functional Partners:
BF49_0629
Cytochrome O ubiquinol oxidase subunit II EC 1103.
 
 
 0.935
BF49_0624
Sensor histidine kinase PrrB RegB EC 273.
 
     0.929
BF49_0626
Cytochrome O ubiquinol oxidase subunit IV EC 1103.
 
     0.922
BF49_0627
Cytochrome O ubiquinol oxidase subunit III EC 1103.
 
  
 0.913
ctaA
Heme A synthase cytochrome oxidase biogenesis protein Cox15CtaA; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
 
 
 0.909
BF49_0628
Cytochrome O ubiquinol oxidase subunit I EC 1103; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.904
BF49_0623
Dna binding response regulator PrrA RegA.
 
     0.886
ctaG
Cytochrome oxidase biogenesis protein Cox11CtaG copper delivery to Cox1; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.883
BF49_0630
MFS permease.
 
     0.832
BF49_5272
Cytochrome c oxidase polypeptide III EC 1931.
  
 
 0.771
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.