STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0630MFS permease. (441 aa)    
Predicted Functional Partners:
BF49_0626
Cytochrome O ubiquinol oxidase subunit IV EC 1103.
 
   
 0.874
BF49_0629
Cytochrome O ubiquinol oxidase subunit II EC 1103.
 
   
 0.841
BF49_0625
Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion.
 
     0.833
BF49_0624
Sensor histidine kinase PrrB RegB EC 273.
 
     0.809
BF49_0627
Cytochrome O ubiquinol oxidase subunit III EC 1103.
 
   
 0.783
BF49_0628
Cytochrome O ubiquinol oxidase subunit I EC 1103; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.680
BF49_0623
Dna binding response regulator PrrA RegA.
 
     0.657
BF49_1970
Cytochrome O ubiquinol oxidase subunit IV EC 1103.
 
   
 0.602
BF49_4014
Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion.
 
     0.514
BF49_1973
Cytochrome O ubiquinol oxidase subunit II EC 1103.
 
   
 0.412
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.