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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0632FIG00439869 hypothetical protein. (254 aa)    
Predicted Functional Partners:
BF49_0319
FIG00740902 hypothetical protein.
  
     0.669
BF49_0326
FIG00740902 hypothetical protein.
  
     0.669
BF49_5822
FIG00741759 hypothetical protein.
  
 
 
 0.669
BF49_3269
FIG00440552 hypothetical protein.
  
     0.654
BF49_4508
Flagellar hooklength control protein FliK.
  
     0.651
BF49_4503
Flagellar export protein.
  
     0.649
rnpA
Ribonuclease P protein component EC 31265; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.636
BF49_2731
Flagellar protein FliJ.
  
     0.629
BF49_0631
Putative Zndependent protease.
 
     0.606
BF49_6400
TolA protein.
 
   
 0.594
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.