Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0636Bll0142 protein. (249 aa)    
Predicted Functional Partners:
BF49_0635
EnoylCoA hydratase EC 42117; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.814
BF49_6320
FIG00439495 hypothetical protein.
  
     0.710
BF49_6270
Hypothetical protein.
  
     0.693
BF49_3904
Blr0101 hypothetical protein.
  
   
 0.685
BF49_6222
InterPro IPR001687IPR002937 COGs COG0492.
  
    0.683
BF49_4240
FIG01004290 hypothetical protein.
  
     0.675
BF49_1848
FIG00442018 hypothetical protein.
  
     0.673
BF49_6409
FIG00443059 hypothetical protein.
 
  
  0.630
BF49_5501
Bll5160 protein.
  
     0.628
BF49_5848
FIG00439847 hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
     0.621
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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