STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0644FIG01006597 hypothetical protein. (193 aa)    
Predicted Functional Partners:
BF49_0643
Bsl8023 protein.
 
    0.819
BF49_2721
Hypothetical protein.
   
    0.592
BF49_6950
Bll4293 hypothetical protein.
  
     0.587
BF49_2748
Chromosome segregation ATPases.
  
     0.565
BF49_6814
FIG00444127 hypothetical protein.
 
     0.551
BF49_5005
FIG00442082 hypothetical protein.
  
     0.534
BF49_0645
2dehydropantoate 2reductase EC 111169; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
    0.533
BF49_1638
Bll3052 protein.
  
     0.496
BF49_3317
FIG00441143 hypothetical protein.
 
     0.488
BF49_5969
Bll5679 protein.
  
     0.481
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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