Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0655Bll4390 protein. (192 aa)    
Predicted Functional Partners:
BF49_3408
Mg2 transport ATPase protein C.
  
  
 0.791
BF49_3192
Mg2 transport ATPase protein C.
  
  
 0.715
BF49_0654
FIG00441286 hypothetical protein.
       0.572
BF49_5786
Bll5848 putative decarboxylase.
   
  
 0.455
BF49_5796
Bll5848 putative decarboxylase.
   
  
 0.455
BF49_5073
FIG01004535 hypothetical protein.
  
     0.453
BF49_0656
2keto3deoxyDarabinoheptulosonate7 phosphate synthase I alpha EC 25154; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
     
 0.441
glsA
Glutaminase EC 3512; Belongs to the glutaminase family.
   
  
 0.403
glsA-2
Glutaminase EC 3512; Belongs to the glutaminase family.
   
  
 0.403
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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