Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0669Membranebound lytic murein transglycosylase B precursor EC 321. (403 aa)    
Predicted Functional Partners:
BF49_5047
Cell division protein FtsI Peptidoglycan synthetase EC 241129.
   
 0.658
BF49_5044
NacetylmuramoylLalanine amidase EC 35128.
    
 0.614
BF49_0742
NacetylmuramoylLalanine amidase EC 35128.
 
  
 0.552
BF49_3144
Betahexosaminidase EC 32152.
    
 0.531
BF49_6787
Beta Nacetylglucosaminidase EC 32152.
    
 0.531
BF49_0668
Hypothetical protein.
       0.529
BF49_7247
NacetylmuramoylLalanine amidase.
    
 0.488
murC
UDPNacetylmuramatealanine ligase EC 6328; Cell wall formation; Belongs to the MurCDEF family.
     
 0.435
BF49_4269
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
 
     0.425
BF49_4439
AsmA family protein.
 
    0.408
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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