STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_0670Ribulose5phosphate 4epimerase and related epimerases and aldolases. (265 aa)    
Predicted Functional Partners:
cbbL
Ribulose bisphosphate carboxylase large chain EC 41139; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
 
 0.735
BF49_1460
Dribulokinase EC 27147.
  
 
 0.686
mtnA
Methylthioribose1phosphate isomerase EC 53123; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
  
 
 0.670
BF49_4190
5methyltetrahydrofolatehomocysteine methyltransferase EC 21113; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.619
BF49_0355
MalylCoA lyase EC 41324; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.607
BF49_2901
MalylCoA lyase EC 41324; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.607
BF49_4864
HydroxymethylglutarylCoA lyase EC 4134; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.607
BF49_4189
Hypothetical protein.
    
 0.601
BF49_1324
Rhamnulokinase RhaK in alphaproteobacteria EC 2715.
  
 
 0.571
xylB
Xylulose kinase EC 27117.
  
 
 0.571
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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