STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0679Tricarboxylate transport membrane protein TctA. (520 aa)    
Predicted Functional Partners:
BF49_0681
Tricarboxylate transport protein TctC.
 
 
 0.932
BF49_0680
Tricarboxylate transport protein TctB.
 
  
 0.926
BF49_5160
Tricarboxylate transport membrane protein TctA.
  
  
 
0.913
BF49_5636
Tricarboxylate transport membrane protein TctA.
  
  
 
0.902
BF49_1203
Tricarboxylate transport protein TctC.
 
 0.887
BF49_3091
Uncharacterized protein UPF0065.
 
 
 0.887
BF49_5634
Tricarboxylate transport protein TctC.
 
 
 0.887
BF49_6340
FIG01007930 hypothetical protein.
 
 
 0.887
BF49_0431
Tricarboxylate transport protein TctC.
 
 
 0.886
BF49_1528
Tricarboxylate transport protein TctC.
 
 0.886
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.