STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0684Transcriptional regulator associated with Tricarboxylic transport. (221 aa)    
Predicted Functional Partners:
BF49_0685
Hypothetical protein.
       0.682
BF49_3240
Transcriptional regulator GntR family.
  
     0.647
BF49_0683
EnoylCoA hydratase EC 42117.
  
    0.551
BF49_0682
CAIBBAIF family protein; Belongs to the CoA-transferase III family.
       0.545
BF49_5173
Acetolactate synthase small subunit EC 2216.
   
    0.504
BF49_1481
Transcriptional regulator GntR family.
 
  
 0.474
BF49_0681
Tricarboxylate transport protein TctC.
       0.444
BF49_6357
Transcriptional regulator GntR family.
  
     0.419
BF49_0686
Catalase EC 11116.
       0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.