STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0709Peptidase C14 caspase catalytic subunit p20. (504 aa)    
Predicted Functional Partners:
BF49_0708
Hypothetical protein.
       0.625
BF49_1612
FIG01006073 hypothetical protein.
 
     0.562
BF49_6222
InterPro IPR001687IPR002937 COGs COG0492.
  
     0.551
BF49_6320
FIG00439495 hypothetical protein.
  
     0.526
BF49_0710
Transcriptional regulatory protein.
       0.495
BF49_6641
Bll4915 protein.
  
     0.447
BF49_4240
FIG01004290 hypothetical protein.
  
     0.445
BF49_2237
Bll2549 hypothetical protein.
  
     0.444
BF49_4056
Bll7938 protein.
  
     0.432
BF49_0898
Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.426
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.