STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0714TfoX domain protein. (151 aa)    
Predicted Functional Partners:
cobB-2
NADdependent protein deacetylase of SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
   0.572
cobB-3
NADdependent protein deacetylase of SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
   0.572
BF49_7108
NADdependent protein deacetylase of SIR2 family.
   
   0.572
BF49_0715
Iron binding protein SufA for ironsulfur cluster assembly; Belongs to the HesB/IscA family.
       0.520
hisA
Phosphoribosylformimino5aminoimidazole carboxamide ribotide isomerase EC 53116.
    
  0.456
hisE
PhosphoribosylATP pyrophosphatase EC 36131.
    
  0.438
BF49_3338
PhosphoribosylATP pyrophosphatase EC 36131; Belongs to the PRA-PH family.
    
  0.438
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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