Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0715Iron binding protein SufA for ironsulfur cluster assembly; Belongs to the HesB/IscA family. (114 aa)    
Predicted Functional Partners:
BF49_0721
Cysteine desulfurase EC 2817.
 
 
 0.967
BF49_6118
Putative ironsulfur cluster assembly scaffold protein for SUF system SufE2.
  
 
 0.956
BF49_5756
Ferredoxin 2Fe2S.
 
 0.950
BF49_0718
Ironsulfur cluster assembly protein SufD.
  
 0.929
BF49_0719
Ironsulfur cluster assembly ATPase protein SufC.
  
 
 0.922
BF49_0720
Ironsulfur cluster assembly protein SufB.
  
 0.905
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.883
BF49_2232
Folatedependent protein for FeS cluster synthesisrepair in oxidative stress; Belongs to the GcvT family.
 
 0.874
BF49_0026
NifUlike domain protein.
 
 0.856
BF49_7351
NifUlike domain protein.
 
 0.856
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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