STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0716PaaDlike protein DUF59 involved in FeS cluster assembly. (123 aa)    
Predicted Functional Partners:
BF49_0719
Ironsulfur cluster assembly ATPase protein SufC.
 
  
 0.960
BF49_0718
Ironsulfur cluster assembly protein SufD.
 
   
 0.952
BF49_0717
Cysteine desulfurase EC 2817 SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.950
BF49_0720
Ironsulfur cluster assembly protein SufB.
 
   
 0.892
BF49_6118
Putative ironsulfur cluster assembly scaffold protein for SUF system SufE2.
 
    0.847
BF49_1800
PhenylacetateCoA oxygenase PaaH subunit.
  
 
 0.817
BF49_1280
Similar to flavohemoprotein.
  
 
 0.712
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
  
 
 0.705
BF49_1799
PhenylacetateCoA oxygenase PaaI subunit.
  
 
 0.663
BF49_1801
PhenylacetateCoA oxygenase PaaG subunit.
  
 
 0.663
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.