Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0723Response regulator of the LytRAlgR family. (284 aa)    
Predicted Functional Partners:
BF49_0722
FIG00440713 hypothetical protein.
 
  
 0.899
proA
Gammaglutamyl phosphate reductase EC 12141; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
 
 0.614
BF49_2142
Twocomponent hybrid sensor and regulator.
     
 0.505
BF49_4032
Naproline symporter Sensor histidine kinase PrlS.
 
   
 0.498
BF49_0014
Transcriptional regulatory protein.
  
   
 0.459
BF49_7339
Transcriptional regulatory protein.
  
   
 0.459
BF49_7155
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
 
   
 0.457
BF49_5832
Multisensor hybrid histidine kinase.
  
  
 0.454
BF49_5972
Twocomponent hybrid sensor and regulator.
  
  
 0.454
BF49_4490
Transcriptional regulator AraC family.
  
   
 0.452
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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