STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0730Major facilitator superfamily. (418 aa)    
Predicted Functional Partners:
BF49_7170
FIG01006802 hypothetical protein.
  
  
 0.825
BF49_2070
Blr1018 hypothetical protein.
  
  
 0.813
tyrS
TyrosyltRNA synthetase EC 6111; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.607
BF49_0728
Hypothetical protein.
       0.596
BF49_2715
Probable oxalateformate antiporter.
  
     0.505
BF49_0636
Bll0142 protein.
  
  
 0.480
BF49_6451
Putative membrane protein.
  
  
0.474
BF49_1049
Oxalateformate antiporter.
  
  
0.473
BF49_6320
FIG00439495 hypothetical protein.
 
     0.469
BF49_2245
Major facilitator superfamily MFS 1.
  
  
0.467
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.