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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0735Peptidase M23M37 family. (423 aa)    
Predicted Functional Partners:
BF49_7276
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
  
   
 0.706
BF49_1585
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
  
   
 0.671
BF49_0741
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
 
   
 0.665
BF49_0734
Thiol peroxidase Bcptype EC 111115.
 
  
 0.609
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase EC 242; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
   
 0.586
secD
Proteinexport membrane protein SecD TC 3A511; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
   
 0.549
BF49_4004
Signal peptidase I EC 342189; Belongs to the peptidase S26 family.
 
  
 0.548
BF49_6514
Signal peptidase I EC 342189; Belongs to the peptidase S26 family.
 
  
 0.535
BF49_6787
Beta Nacetylglucosaminidase EC 32152.
 
 
 0.535
BF49_0736
Protein of unknown function DUF1452.
       0.527
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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