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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0742NacetylmuramoylLalanine amidase EC 35128. (417 aa)    
Predicted Functional Partners:
BF49_7247
NacetylmuramoylLalanine amidase.
  
  
  0.918
BF49_6787
Beta Nacetylglucosaminidase EC 32152.
    
 0.680
BF49_0741
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
 
   
 0.676
BF49_0425
Periplasmic septal ring factor with murein hydrolase activity EnvCYibP.
 
 
 0.660
BF49_6096
INTEGRAL MEMBRANE PROTEIN Rhomboid family.
  
   0.649
BF49_0230
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.623
BF49_1872
FIG00444197 hypothetical protein.
   
  
 0.581
BF49_6848
Blr4679 hypothetical protein.
   
  
 0.581
BF49_0669
Membranebound lytic murein transglycosylase B precursor EC 321.
 
  
 0.570
BF49_4202
NLPP60 family lipoprotein.
  
 
 0.555
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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