STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0748Substratespecific component BioY of biotin ECF transporter. (184 aa)    
Predicted Functional Partners:
cobB
Cobyrinic acid ACdiamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
  
 0.767
BF49_0755
Biotin carboxylase of acetylCoA carboxylase EC 63414; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
  
  0.680
BF49_7199
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
 
  
  0.629
BF49_3681
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
 
  
  0.620
BF49_7095
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
 
  
  0.620
BF49_6363
Biotin carboxylase EC 63414 Biotin carboxyl carrier protein.
 
  
  0.619
BF49_6653
Biotinprotein ligase EC 6349 EC 63410 EC 63411 EC 63415.
 
   
 0.592
dctA
C4dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.564
BF49_0749
Valinepyruvate aminotransferase EC 26166.
       0.564
BF49_2830
Biotin carboxylase EC 63414.
 
  
 0.483
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.