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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0749Valinepyruvate aminotransferase EC 26166. (395 aa)    
Predicted Functional Partners:
BF49_0689
Homoserine dehydrogenase EC 1113.
 
 0.734
BF49_0563
Aspartokinase EC 2724; Belongs to the aspartokinase family.
 
 0.669
BF49_3186
Ornithine decarboxylase EC 41117 Arginine decarboxylase EC 41119; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
 
 0.649
lysA
Diaminopimelate decarboxylase EC 41120; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
 
 0.634
BF49_4190
5methyltetrahydrofolatehomocysteine methyltransferase EC 21113; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.601
BF49_0917
NADdependent malic enzyme EC 11138.
  
 0.590
dapB
4hydroxytetrahydrodipicolinate reductase EC 11718; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
  
 0.579
BF49_0750
Bll4295 protein.
    
  0.565
mdh
Malate dehydrogenase EC 11137; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.564
BF49_0748
Substratespecific component BioY of biotin ECF transporter.
       0.564
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.