Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0762FIG00441685 hypothetical protein. (312 aa)    
Predicted Functional Partners:
BF49_2921
Hypothetical protein.
  
     0.765
BF49_1613
FIG00445928 hypothetical protein.
  
     0.576
BF49_5822
FIG00741759 hypothetical protein.
  
  
  0.563
BF49_0761
Lipaseesterase.
       0.542
BF49_0507
4hydroxyphenylpyruvate dioxygenase EC 1131127.
   
 
  0.534
BF49_2674
Conserved hypothetical protein.
   
 
  0.534
BF49_5754
Kinesinlike protein.
 
     0.516
BF49_3063
FIG00441725 hypothetical protein.
  
     0.512
BF49_5138
TolA protein.
  
     0.510
BF49_1646
Bll3046 protein.
  
     0.504
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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