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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0785DNAcytosine methyltransferase EC 21137. (403 aa)    
Predicted Functional Partners:
BF49_5701
Sadenosylmethionine synthetase EC 2516; Belongs to the AdoMet synthase family.
    
 0.938
ahcY
Adenosylhomocysteinase EC 3311; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.923
BF49_1687
5methylthioadenosine nucleosidase EC 32216 Sadenosylhomocysteine nucleosidase EC 3229.
    
  0.922
dnaG
DNA primase EC 277; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
 
  
 0.516
BF49_0783
DNA3methyladenine glycosylase II EC 32221; Belongs to the DNA glycosylase MPG family.
       0.505
BF49_0784
Hypothetical protein.
       0.505
BF49_2201
FIG00852780 hypothetical protein.
  
  
 0.447
BF49_2283
Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.430
BF49_0782
Endonuclease.
  
  
 0.419
ndk
Nucleoside diphosphate kinase EC 2746; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
     
 0.413
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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