Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0793Superfamily I DNA and RNA helicases and helicase subunits. (1144 aa)    
Predicted Functional Partners:
BF49_3835
Mobile element protein.
  
    0.836
BF49_0792
Hypothetical protein.
       0.773
BF49_4492
Glucans biosynthesis protein C EC 21.
 
    0.628
BF49_2442
Acyltransferase.
 
    0.625
BF49_5928
FIG00439832 hypothetical protein.
 
    0.618
BF49_0159
NADPHquinone oxidoreductase.
  
    0.570
BF49_0855
NADPHdependent FMN reductase.
  
    0.570
BF49_6752
FIG00441649 hypothetical protein.
  
    0.570
BF49_0722
FIG00440713 hypothetical protein.
  
    0.568
BF49_2446
Acyltransferase 3.
  
    0.568
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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