Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0823Omethyltransferase EC 211. (221 aa)    
Predicted Functional Partners:
BF49_0822
Transcriptional regulator TetR family.
 
     0.888
BF49_3676
NADHUBIQUINONE OXIDOREDUCTASE 18 KD SUBUNIT EC 1653 EC 16993.
  
  
 0.794
BF49_7100
NADHUBIQUINONE OXIDOREDUCTASE 18 KD SUBUNIT EC 1653 EC 16993.
  
  
 0.794
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.779
BF49_6971
Hypothetical protein.
  
 0.659
BF49_5701
Sadenosylmethionine synthetase EC 2516; Belongs to the AdoMet synthase family.
  
 
 0.617
BF49_2667
Uncharacterized protein conserved in bacteria NMA0228like; Belongs to the UPF0276 family.
  
    0.612
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
   
 0.589
BF49_5306
TPR repeat.
  
 
 0.541
BF49_1687
5methylthioadenosine nucleosidase EC 32216 Sadenosylhomocysteine nucleosidase EC 3229.
 
  
  0.525
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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