STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0871Aerobictype carbon monoxide dehydrogenase large subunit CoxLCutL homologs. (923 aa)    
Predicted Functional Partners:
BF49_0872
Aerobictype carbon monoxide dehydrogenase small subunit CoxSCutS homologs.
 
 0.984
BF49_0873
Putative Isoquinoline 1oxidoreductase subunit Mll3835 protein.
 
    0.854
BF49_2397
Periplasmic aromatic aldehyde oxidoreductase ironsulfur subunit YagT.
 
 0.797
BF49_1502
Periplasmic aromatic aldehyde oxidoreductase ironsulfur subunit YagT.
 
 0.789
BF49_2712
Xanthine dehydrogenase YagT iron-sulfur-binding subunit; Periplasmic aromatic aldehyde oxidoreductase ironsulfur subunit YagT 4hydroxybenzoylCoA reductase gamma subunit EC 139920.
 
 0.773
BF49_2396
Periplasmic aromatic aldehyde oxidoreductase FAD binding subunit YagS.
 
 0.757
BF49_5984
Carbon monoxide dehydrogenase small chain EC 12992.
 
 0.742
BF49_4858
Carbon monoxide dehydrogenase small chain EC 12992.
 
 0.735
BF49_0511
Carbon monoxide dehydrogenase small chain EC 12992.
 
 0.724
BF49_1503
Periplasmic aromatic aldehyde oxidoreductase FAD binding subunit YagS.
  
 0.723
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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