STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0886FIG01004486 hypothetical protein. (273 aa)    
Predicted Functional Partners:
BF49_2462
Alginate biosynthesis protein AlgX.
  
 0.843
BF49_0887
Hypothetical ABC transport system periplasmic component.
  
    0.689
BF49_6778
Exopolysacchride production negative regulator ExoR.
  
     0.629
BF49_2158
Probable RuBisCoexpression protein CbbX.
   
 0.614
BF49_0888
FIG00446645 hypothetical protein.
       0.595
BF49_6223
Phospholipidlipopolysaccharide ABC transporter.
  
  
  0.451
BF49_6320
FIG00439495 hypothetical protein.
 
 
 0.413
BF49_5713
Lipid A export ATPbindingpermease protein MsbA.
  
  
  0.412
BF49_0496
Peptidase C14 caspase catalytic subunit p20.
 
 
 
 0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.