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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0892Protein tyrosine phosphatase EC 31348. (262 aa)    
Predicted Functional Partners:
BF49_6651
NADHubiquinone oxidoreductase chain M EC 1653.
    
 
 0.781
BF49_5306
TPR repeat.
  
   0.702
BF49_5717
ADPheptoselipooligosaccharide heptosyltransferase II EC 241.
  
   0.677
BF49_6834
Peptidylprolyl cistrans isomerase EC 5218; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.661
BF49_6836
Peptidylprolyl cistrans isomerase EC 5218; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.661
BF49_0017
FIG00444284 hypothetical protein.
   
 
 0.658
BF49_2937
Sulfate permease.
   
 
 0.658
BF49_3561
Blr3473 probable sulfate transporter.
   
 
 0.658
BF49_5112
Sulfate permease.
   
 
 0.658
BF49_7342
FIG00444284 hypothetical protein.
   
 
 0.658
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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