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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0906Predicted transcriptional regulator of pyridoxine metabolism. (495 aa)    
Predicted Functional Partners:
BF49_0905
FIG00444345 hypothetical protein.
 
    0.791
BF49_0907
Bsl4153 hypothetical protein.
       0.619
BF49_0689
Homoserine dehydrogenase EC 1113.
 
 
 0.540
BF49_1090
Type III PLP lowspecificity Dthreonine aldolase.
  
 
  0.498
BF49_0563
Aspartokinase EC 2724; Belongs to the aspartokinase family.
   
 
 0.485
BF49_0904
Acetylornithine deacetylase EC 35116.
     
 0.471
BF49_3262
Cyclohexadienyl dehydrogenase EC 13112EC 13143.
    
 0.456
BF49_3260
Chorismate mutase I EC 54995.
    
 0.454
BF49_4194
Prephenate dehydratase EC 42151.
    
 0.449
BF49_5647
Asparagine synthetase glutaminehydrolyzing EC 6354.
  
 
 0.441
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.