Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0914FIG01006880 hypothetical protein. (341 aa)    
Predicted Functional Partners:
BF49_0915
Bll4147 protein.
       0.781
BF49_5467
2oxo4hydroxy4carboxy5ureidoimidazoline OHCU decarboxylase 5Hydroxyisourate Hydrolase HIUase EC 35217.
  
 
  0.580
BF49_0912
FIG00852389 hypothetical protein.
 
     0.502
BF49_4330
FIG00439920 hypothetical protein.
  
     0.494
BF49_0913
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
       0.482
BF49_2142
Twocomponent hybrid sensor and regulator.
 
   
 0.450
BF49_0412
FIG00441012 hypothetical protein.
  
     0.445
BF49_1624
Bll3066 protein.
  
 
 0.407
BF49_2269
Mll1762 protein.
  
 
 0.407
BF49_2785
4amino4deoxyLarabinose transferase and related glycosyltransferases of PMT family.
  
 
 0.407
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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