STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
BF49_0928Adenosylmethionine8amino7oxononanoate aminotransferase EC 26162; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)    
Predicted Functional Partners:
BF49_6021
2ketoglutaric semialdehyde dehydrogenase EC 12126.
    
 0.937
BF49_7343
Succinatesemialdehyde dehydrogenase NADP EC 12116; Belongs to the aldehyde dehydrogenase family.
    
 0.937
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.874
BF49_1867
Aldehyde dehydrogenase EC 1213.
    
 0.874
BF49_3132
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.874
BF49_4033
5aminolevulinate synthase EC 23137.
  
 
 0.736
argC
Nacetylgammaglutamylphosphate reductase EC 12138; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.606
BF49_0563
Aspartokinase EC 2724; Belongs to the aspartokinase family.
    
 0.592
asd-2
Aspartatesemialdehyde dehydrogenase EC 12111; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
  
 0.543
BF49_1098
Methylmalonatesemialdehyde dehydrogenase EC 12127.
    
 0.541
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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