STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0946NiFehydrogenase I cytochrome b subunit. (187 aa)    
Predicted Functional Partners:
BF49_0945
FIG01005667 hypothetical protein.
 
     0.927
BF49_0942
Periplasmic sensor signal transduction histidine kinase.
 
     0.643
BF49_0944
Hypothetical protein.
 
     0.617
BF49_0943
Twocomponent transcriptional regulator winged helix family precursor.
 
     0.530
BF49_6886
Beta13glucosyl transferase.
 
 0.457
BF49_0949
Hypothetical protein.
       0.415
BF49_0948
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.413
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.