STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0964FIG000906 Predicted Permease. (363 aa)    
Predicted Functional Partners:
BF49_0963
FIG000988 Predicted permease.
 
 0.999
BF49_0119
ABC transporter ATPbinding protein.
 
 
 0.994
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
 
 0.971
ugpC
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
     
  0.897
BF49_1138
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
     
  0.897
BF49_2363
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
     
  0.897
BF49_2364
Glycerol3phosphate ABC transporter ATPbinding protein UgpC TC 3A113; Belongs to the ABC transporter superfamily.
     
  0.897
BF49_6936
Maltosemaltodextrin transport ATPbinding protein MalK EC 36319 Multiple sugar ABC transporter ATPbinding protein.
     
  0.897
BF49_1462
Various polyols ABC transporter ATPbinding component; Belongs to the ABC transporter superfamily.
     
  0.853
BF49_5751
ABCtype transport system involved in resistance to organic solvents permease component USSDB6A.
  
 
 0.832
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.